All functions

biomee_gs_leuning_drivers

rsofun BiomeE driver data (Leuning photosynthesis model)

biomee_gs_leuning_output

rsofun BiomeE (gs_leuning) output data

biomee_p_model_drivers

rsofun BiomeE driver data (P-model photosynthesis model)

biomee_p_model_output

rsofun BiomeE (P-model) output data

biomee_validation

rsofun BiomeE targets validation data

calib_sofun()

Calibrates SOFUN model parameters

cost_likelihood_biomee()

Log-likelihood cost function for BiomeE with different targets

cost_likelihood_pmodel()

Cost function computing a log-likelihood for calibration of P-model parameters

cost_rmse_biomee()

RMSE cost function for BiomeE

cost_rmse_pmodel()

Cost function computing RMSE for calibration of P-model parameters

init_dates_dataframe()

Initialises a tibble with dates

p_model_drivers

rsofun P-model driver data

p_model_drivers_vcmax25

rsofun P-model driver data (for leaf traits)

p_model_output

rsofun P-model output data

p_model_output_vcmax25

rsofun P-model output data (using vcmax25 drivers)

p_model_validation

rsofun P-model GPP validation data

p_model_validation_vcmax25

rsofun P-model Vcmax25 validation data

run_biomee_f_bysite()

Run BiomeE (R wrapper)

run_pmodel_f_bysite()

Run P-model (R wrapper)

runread_biomee_f()

Run BiomeE

runread_pmodel_f()

Run P-model