All functions

calc_daily_solar()

Calculates daily photosynthetic photon flux density (ppfd) and other solar parameters

calc_patm()

Calculates atmospheric pressure

calc_tgrowth()

Calculate growth temperature

calc_vp()

Calculate vapor pressure from relative humidity

calc_vp_inst()

Instantaneous vapour pressure

calc_vpd()

Calculate vapour pressure deficit from relative humidity

calc_vpd_inst()

Calculate instantenous VPD from ambient conditions

collect_drivers_sofun()

Collect all drivers

df_drivers

Demo data

gapfill_interpol()

Gap fills a modis time series

gapfill_interpol_gee()

Gapfill GEE data products

get_daily_prec()

Implements a weather generator

get_obs_bysite_fluxnet()

Get FLUXNET observational data for one site.

get_obs_bysite_gpp_gepisat()

The GePiSaT method flux decomposition.

get_settings_fluxnet()

Defines settings for settings for FLUXNET data ingestion

get_settings_gee()

Defines settings for settings for Google Earth Engine download

get_settings_modis()

Defines settings for settings for MODIS download using MODISTools

get_settings_soilgrids()

Defines settings for settings for SoilGrids ingest

get_settings_wise()

Defines settings for settings for WISE30sec ingest

get_tmax_fluxnet2015()

Get daily maximum temperature for all files in a directory.

get_tmax_fluxnet2015_byfile()

Get daily maximum temperature

get_tmin_fluxnet2015()

Get daily minimum temperature for all files in a directory.

get_tmin_fluxnet2015_byfile()

Get daily minimum temperature

get_vpd_day_fluxnet2015()

Get daytime VPD for all files in a directory.

get_vpd_day_fluxnet2015_byfile()

Get daytime VPD

ingest()

Data ingest

ingest_bysite()

Data ingest for a single site

ingest_gee_bysite()

Defines settings for settings for Google Earth Engine download

ingest_globalfields()

Ingest from global fields

ingest_modis_bysite()

Download data by site

ingest_soilgrids()

SoilGrids point ingest

ingest_wise_byvar()

WISE30sec ingest

init_dates_dataframe()

Initialises a data frame with dates

monthly2daily()

Interpolates monthly to daily values

prepare_setup_sofun()

Complements the setup settings

read_plumber()

Reads plumber2 netcdf data

remove_outliers()

Remove outliers

siteinfo_fluxnet2015

Meta information of all FLUXNET 2015 sites

siteinfo_globresp

Demo data